BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017F11SP1|AL427195
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1453 1931 0.0
>3x_Contig1453
Length = 8444
Score = 1931 bits (973), Expect = 0.0
Identities = 981/983 (99%), Gaps = 1/983 (0%)
Strand = Plus / Minus
Query: 1 gatcaattccgtctggtgcctctatctatatcacgtttcgaagcatctctaagtatacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5191 gatcaattccgtctggtgcctctatctatatcacgtttcgaagcatctctaagtatacct 5132
Query: 61 tcaatatcaattcaacgtatataataataatatcatatacagatgcatatatattattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5131 tcaatatcaattcaacgtatataataataatatcatatacagatgcatatatattattca 5072
Query: 121 aatttcaagattttgtttgtttgaatattgaccatgcgagaaatttatccgggtaatgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5071 aatttcaagattttgtttgtttgaatattgaccatgcgagaaatttatccgggtaatgcg 5012
Query: 181 ggttaggatgacaaggcatcagcggcggttgaacattcattcattcattccaccttgaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5011 ggttaggatgacaaggcatcagcggcggttgaacattcattcattcattccaccttgaac 4952
Query: 241 cacgtgattgtctttctctttggaaagctgttaatacctggcgacactctctctacccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4951 cacgtgattgtctttctctttggaaagctgttaatacctggcgacactctctctacccac 4892
Query: 301 tcttcaggtaaaaatggcatgtggttggaataggaaaaacgggaattttgcccgtatctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4891 tcttcaggtaaaaatggcatgtggttggaataggaaaaacgggaattttgcccgtatctc 4832
Query: 361 gaaaccacggtaccgtgttaggggcgattgacacagcaatccatttctcttcgcattaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4831 gaaaccacggtaccgtgttaggggcgattgacacagcaatccatttctcttcgcattaca 4772
Query: 421 tgatccataagtgaagtgttatgggttgcagtatagcatgcttagtttatcagatgatgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4771 tgatccataagtgaagtgttatgggttgcagtatagcatgcttagtttatcagatgatgg 4712
Query: 481 aagctccgggtggtcacaagatgaaaggatgtattaaccggaattttttgaatgtcttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4711 aagctccgggtggtcacaagatgaaaggatgtattaaccggaattttttgaatgtcttct 4652
Query: 541 gtctatctctctatctatctatctatctgtttcttgtttgtaatcattaaaaacgctgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4651 gtctatctctctatctatctatctatctgtttcttgtttgtaatcattaaaaacgctgca 4592
Query: 601 tgggtatcttcttacgagtttttgcaacgcaatcaggaaaaaccactaccgaacatcaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4591 tgggtatcttcttacgagtttttgcaacgcaatcaggaaaaaccactaccgaacatcaaa 4532
Query: 661 acctttataaggttacagcaattgcaaaggcgacggtatcgacttgacacttcaattgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4531 acctttataaggttacagcaattgcaaaggcgacggtatcgacttgacacttcaattgca 4472
Query: 721 cctttatagtatatagtaggggaggtattaccattaaattatatcttcgctattcgtaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4471 cctttatagtatatagtaggggaggtattaccattaaattatatcttcgctattcgtaaa 4412
Query: 781 gtctataccaatttctttctgaaggtcactgaagagatcggataggttgataagacagca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4411 gtctataccaatttctttctgaaggtcactgaagagatcggataggttgataagacagca 4352
Query: 841 tcaagtgaagatgtcaaagccagttgttttaagattaggtcaggttaagtacgctcaaaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4351 tcaagtgaagatgtcaaagccagttgttttaagattaggtcaggttaagtacgctcaaaa 4292
Query: 901 ggcatgggraagagctttcaaagattgcacaagttattccaattgacccatccctcacaa 960
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4291 ggcatggg-aagagctttcaaagattgcacaagttattccaattgacccatccctcacaa 4233
Query: 961 gagctcaattcttagatyaatgt 983
||||||||||||||||| |||||
Sbjct: 4232 gagctcaattcttagatcaatgt 4210
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8274
Number of Sequences: 1807
Number of extensions: 8274
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)